PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0069ss01710.2
Common NameLR48_Vigan406s019300
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 194aa    MW: 21394.1 Da    PI: 4.9165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0069ss01710.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-182676155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  Vang0069ss01710.2 26 PVYHGVRKRN-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALTIKG 76
                       68*****887.**********843...6**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.2E-132676IPR001471AP2/ERF domain
PROSITE profilePS5103222.7212784IPR001471AP2/ERF domain
SMARTSM003803.0E-332790IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-212784IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.6E-312785IPR001471AP2/ERF domain
PRINTSPR003679.6E-102839IPR001471AP2/ERF domain
CDDcd000188.58E-322885No hitNo description
PRINTSPR003679.6E-105066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
LSSPSSHSGP KAHARAKRPR DCSKHPVYHG VRKRNWGKWV SEIREPRKKS RIWLGTFATP  60
EMAARAHDVA ALTIKGQSAI LNFPEIADLL PRPLTCSPRD IQAAATAAAS MSKFDPVTQT  120
SDSETETSEE SELSEIVELP NIEDSFDSSV DSFVMVDVVD SWMFPPLDSF CAAFSDELFP  180
QQCCSETLLP IWD*
3D Structure ? help Back to Top